ID | MiRname | Score | TarASregion | GenomicSite | TarGene | Strand | AStype | TarSeq | miRNASeq | Software | Sequence Description |
1 |
zma-miR529-5p |
2.8 |
|
chr5:691268-691289|miR529-5p|chr5:689692-693376 |
Zm00001d012811 |
+ |
IntronR |
Query:1AGAAGAGAGAGAGTACAGCC-T21* | * | | | | | | | | | | : | | | : | | * |Sbjct:1598GCGTCTCTCTCTCGTGTTGGTA1577 |
AGAAGAGAGAGAGTACAGCC-T |
psRobot |
La-related protein 1C |
2 |
zma-miR393b-3p |
3.0 |
|
chr5:690860-690881|miR393b-3p|chr5:689692-693376 |
Zm00001d012811 |
+ |
IntronR |
Query:1ATCAATGCGATCCTTTTGGAGG22| | | | | : : | : | | | * | | | | : | | : |Sbjct:1190TAGTTGTGTTAGTAAAATCTTC1169 |
ATCAATGCGATCCTTTTGGAGG |
psRobot |
La-related protein 1C |
3 |
zma-miR398a-5p |
3.0 |
|
chr8:174690011-174690030|miR398a-5p|chr8:174689929-174690926 |
Zm00001d012446 |
- |
ExonS |
Query:1GGGGCGAACTGAGAACACATG21* : | | | | | * | | | | : | | | | * | | |Sbjct:102GTCCGCTAGACTTTTGT-TAC83 |
GGGGCGAACTGAGAACACATG |
psRobot |
V-type proton ATPase subunit a1 |
4 |
zma-miR395k-3p |
3.0 |
|
chr5:198085742-198085762|miR395k-3p|chr5:198085448-198085960 |
Zm00001d017512 |
+ |
IntronR |
Query:1GTGAAGTGTTTGAGGAAACTC21| | | * | | | | | | | | | : : | | | * | *Sbjct:315CACATCACAAACTTTTTTTAT295 |
GTGAAGTGTTTGAGGAAACTC |
psRobot |
YbaK/aminoacyl-tRNA synthetase-associated domain |
5 |
zma-miR396h,zma-miR396g-5p |
3.0 |
|
chr8:121739524-121739543|miR396h,miR396g-5p|chr8:121739450-121744073 |
Zm00001d010606 |
+ |
AltA |
Query:1TCCCACAGCTTTATTGAACTG21| | | | | * | | | | | : | | | | * | * | |Sbjct:94AGGGTATCGAAGTAACAT-AC75 |
TCCCACAGCTTTATTGAACTG |
psRobot |
Protein RETICULATA-RELATED 6 chloroplastic |
6 |
zma-miR396h,zma-miR396g-5p |
3.0 |
|
chr8:121739524-121739543|miR396h,miR396g-5p|chr8:121739310-121744073 |
Zm00001d010606 |
+ |
IntronR |
Query:1TCCCACAGCTTTATTGAACTG21| | | | | * | | | | | : | | | | * | * | |Sbjct:234AGGGTATCGAAGTAACAT-AC215 |
TCCCACAGCTTTATTGAACTG |
psRobot |
Protein RETICULATA-RELATED 6 chloroplastic |
7 |
zma-miR171b-5p |
3.0 |
|
chr8:121741651-121741670|miR171b-5p|chr8:121739310-121744073 |
Zm00001d010606 |
+ |
IntronR |
Query:1GATATTGGCGCGGTTCAATC20| * | | : | | | | * | | : | | | | | | |Sbjct:2361CCATGACCGGGCTAAGTTAG2342 |
GATATTGGCGCGGTTCAATC |
psRobot |
Protein RETICULATA-RELATED 6 chloroplastic |
8 |
zma-miR171b-5p |
3.0 |
|
chr8:121741651-121741670|miR171b-5p|chr8:121739450-121744073 |
Zm00001d010606 |
+ |
AltA |
Query:1GATATTGGCGCGGTTCAATC20| * | | : | | | | * | | : | | | | | | |Sbjct:2221CCATGACCGGGCTAAGTTAG2202 |
GATATTGGCGCGGTTCAATC |
psRobot |
Protein RETICULATA-RELATED 6 chloroplastic |
9 |
zma-miR164e-5p |
2.8 |
|
chr1:21288663-21288683|miR164e-5p|chr1:21288480-21289262 |
Zm00001d028039 |
+ |
IntronR |
Query:1TGGAGAAGCAGGACACGTGAG21| | : | | | | : | | | | | | | * | | : * |Sbjct:204ACTTCTTTGTCCTGTTCATAC184 |
TGGAGAAGCAGGACACGTGAG |
psRobot |
Probable protein S-acyltransferase 22 |
10 |
zma-miR164h-5p |
2.8 |
|
chr1:21288663-21288683|miR164h-5p|chr1:21288480-21289262 |
Zm00001d028039 |
+ |
IntronR |
Query:1TGGAGAAGCAGGGCACGTGTG21| | : | | | | : | | | | : | | * | | : | |Sbjct:204ACTTCTTTGTCCTGTTCATAC184 |
TGGAGAAGCAGGGCACGTGTG |
psRobot |
Probable protein S-acyltransferase 22 |
11 |
zma-miR159k-3p,zma-miR159b-3p,zma-miR159f-3p,zma-m |
3.0 |
|
chr3:58482466-58482486|miR159k-3p,miR159b-3p,miR159f-3p,miR159j-3p,miR159a-3p|chr3:58482342-58482642 |
Zm00001d040691 |
+ |
IntronR |
Query:1TTTGGATTGAAGGGAGCTCTG21| | | | : | | | | | * | | | * | | | * | |Sbjct:145AAACTTAACTCCCCACGATAC125 |
TTTGGATTGAAGGGAGCTCTG |
psRobot |
Probable receptor-like protein kinase |
12 |
zma-miR399f-3p |
2.8 |
|
chr1:78395029-78395049|miR399f-3p|chr1:78394592-78395263 |
Zm00001d029598 |
- |
IntronR |
Query:1TGCCAAAGGAAATTTGCCCCG21* | | | | | | * | | | | | : | | | | * | :Sbjct:458CCGGTTTACTTTAGACGGAGT438 |
TGCCAAAGGAAATTTGCCCCG |
psRobot |
Transcription initiation factor TFIID subunit 4b |
13 |
zma-miR2275d-5p |
3.0 |
|
chr3:217215710-217215729|miR2275d-5p|chr3:217215317-217215959 |
Zm00001d044026 |
+ |
AltA |
Query:1AGAGTTGGAGGAAAGAAAACT21| | | : * | | : | : | | | | | | | * | | |Sbjct:413TCTTCACTTTCTTTCTT-TGA394 |
AGAGTTGGAGGAAAGAAAACT |
psRobot |
Transducin/WD40 repeat-like superfamily protein |
14 |
zma-miR2275d-5p |
3.0 |
|
chr3:217215710-217215729|miR2275d-5p|chr3:217215046-217215847 |
Zm00001d044026 |
+ |
IntronR |
Query:1AGAGTTGGAGGAAAGAAAACT21| | | : * | | : | : | | | | | | | * | | |Sbjct:684TCTTCACTTTCTTTCTT-TGA665 |
AGAGTTGGAGGAAAGAAAACT |
psRobot |
Transducin/WD40 repeat-like superfamily protein |
15 |
zma-miR2275d-5p |
3.0 |
|
chr3:217215710-217215729|miR2275d-5p|chr3:217215044-217215847 |
Zm00001d044026 |
+ |
IntronR |
Query:1AGAGTTGGAGGAAAGAAAACT21| | | : * | | : | : | | | | | | | * | | |Sbjct:686TCTTCACTTTCTTTCTT-TGA667 |
AGAGTTGGAGGAAAGAAAACT |
psRobot |
Transducin/WD40 repeat-like superfamily protein |
16 |
zma-miR2275d-5p |
3.0 |
|
chr3:217215710-217215729|miR2275d-5p|chr3:217215571-217215847 |
Zm00001d044026 |
+ |
IntronR |
Query:1AGAGTTGGAGGAAAGAAAACT21| | | : * | | : | : | | | | | | | * | | |Sbjct:159TCTTCACTTTCTTTCTT-TGA140 |
AGAGTTGGAGGAAAGAAAACT |
psRobot |
Transducin/WD40 repeat-like superfamily protein |
17 |
zma-miR2275d-5p |
3.0 |
|
chr3:217215710-217215729|miR2275d-5p|chr3:217215031-217215862 |
Zm00001d044026 |
+ |
IntronR |
Query:1AGAGTTGGAGGAAAGAAAACT21| | | : * | | : | : | | | | | | | * | | |Sbjct:699TCTTCACTTTCTTTCTT-TGA680 |
AGAGTTGGAGGAAAGAAAACT |
psRobot |
Transducin/WD40 repeat-like superfamily protein |
18 |
zma-miR2275d-5p |
3.0 |
|
chr3:217215710-217215729|miR2275d-5p|chr3:217215048-217215854 |
Zm00001d044026 |
+ |
IntronR |
Query:1AGAGTTGGAGGAAAGAAAACT21| | | : * | | : | : | | | | | | | * | | |Sbjct:682TCTTCACTTTCTTTCTT-TGA663 |
AGAGTTGGAGGAAAGAAAACT |
psRobot |
Transducin/WD40 repeat-like superfamily protein |
19 |
zma-miR2275d-5p |
3.0 |
|
chr3:217215710-217215729|miR2275d-5p|chr3:217215047-217215959 |
Zm00001d044026 |
+ |
IntronR |
Query:1AGAGTTGGAGGAAAGAAAACT21| | | : * | | : | : | | | | | | | * | | |Sbjct:683TCTTCACTTTCTTTCTT-TGA664 |
AGAGTTGGAGGAAAGAAAACT |
psRobot |
Transducin/WD40 repeat-like superfamily protein |
20 |
zma-miR2275d-5p |
3.0 |
|
chr3:217215710-217215729|miR2275d-5p|chr3:217215529-217215847 |
Zm00001d044026 |
+ |
IntronR |
Query:1AGAGTTGGAGGAAAGAAAACT21| | | : * | | : | : | | | | | | | * | | |Sbjct:201TCTTCACTTTCTTTCTT-TGA182 |
AGAGTTGGAGGAAAGAAAACT |
psRobot |
Transducin/WD40 repeat-like superfamily protein |
21 |
zma-miR2275c-5p |
5.0 |
|
chr3:217218405-217218425|miR2275c-5p|chr3:217217071-217218743 |
Zm00001d044026 |
+ |
IntronR |
GTTTCAAGTATTTCTAACCCT |
AGGATTAGAGGGACTTGAACC |
miRferno |
Transducin/WD40 repeat-like superfamily protein |
22 |
zma-miR2275c-5p |
5.0 |
|
chr3:217218405-217218425|miR2275c-5p|chr3:217217499-217218493 |
Zm00001d044026 |
+ |
ExonS |
GTTTCAAGTATTTCTAACCCT |
AGGATTAGAGGGACTTGAACC |
miRferno |
Transducin/WD40 repeat-like superfamily protein |
23 |
zma-miR399c-5p |
5 |
|
chr7:4773129-4773149|miR399c-5p|chr7:4773109-4773272 |
Zm00001d018770 |
+ |
ExonS |
TGAGCCAAAGCAGAAGTTCCA |
GGGTACGTCTCCTTTGGCACA |
miRferno |
GYF domain-containing protein |
24 |
zma-miR399c-5p |
5 |
|
chr7:4773129-4773149|miR399c-5p|chr7:4772778-4773272 |
Zm00001d018770 |
+ |
AltD |
TGAGCCAAAGCAGAAGTTCCA |
GGGTACGTCTCCTTTGGCACA |
miRferno |
GYF domain-containing protein |
25 |
zma-miR399c-5p |
5 |
|
chr7:4773129-4773149|miR399c-5p|chr7:4772775-4773272 |
Zm00001d018770 |
+ |
AltD |
TGAGCCAAAGCAGAAGTTCCA |
GGGTACGTCTCCTTTGGCACA |
miRferno |
GYF domain-containing protein |
26 |
zma-miR169o-3p |
3.0 |
|
chr1:245851793-245851811|miR169o-3p|chr1:245850422-245854038 |
Zm00001d032989 |
+ |
IntronR |
Query:1GGCAGGTCTTCTTGGCTAGC20| | | | | | | * | | * | | | | | | * | *Sbjct:1390CCGTCCAAAACAACCGA-CA1372 |
GGCAGGTCTTCTTGGCTAGC |
psRobot |
Serine/threonine-protein phosphatase |
27 |
zma-miR482-3p |
2.8 |
|
chr3:147927497-147927516|miR482-3p|chr3:147927277-147929485 |
Zm00001d042033 |
- |
IntronR |
Query:1TCTTCCTTGTTCCTCCCATT20: | | : | | | | | | | | | : * | | * | |Sbjct:240GGAGGGAACAAGGGAGGGAA221 |
TCTTCCTTGTTCCTCCCATT |
psRobot |
Pentatricopeptide repeat-containing protein mitochondrial |
28 |
zma-miR482-3p |
2.8 |
|
chr3:147927510-147927529|miR482-3p|chr3:147927286-147929489 |
Zm00001d042033 |
- |
IntronR |
Query:1TCTTCCTTGTTCCTCCCATT20: | | : | | | | | | | | | : * | | * | |Sbjct:244GGAGGGAACAAGGGAGGGAA225 |
TCTTCCTTGTTCCTCCCATT |
psRobot |
Pentatricopeptide repeat-containing protein mitochondrial |
29 |
zma-miR399i-5p |
5 |
|
chr5:81113560-81113580|miR399i-5p|chr5:81113513-81113780 |
Zm00001d015248 |
+ |
IntronR |
CACGCAAGAGGAGCGGCGCAG |
GTGCGGCTCTCCTCTGGCATG |
miRferno |
Splicing factor 3B subunit 1 |
30 |
zma-miR164g-3p |
3.5 |
|
chr3:234429981-234430001|miR164g-3p|chr3:234429809-234430638 |
Zm00001d044667 |
+ |
IntronR |
GGTGCAGGAGGCGAGCACGAG |
CACGTGCTCCCCTTCTCCACC |
miRferno |
Nucleic acid binding protein |