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Oryza sativa alternative back-splicing

Total 27138 records in 905 Pages. Current page: 1
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  • Circ_regionGene_nameStrandTypeTissuesSoftwareCircular_IDExon_covermiR_tar_exonSequence Description
    LOC_Os01g45960
    +
    exonic
    root
    NA
    osa_circ_002898
    LOC_Os01g45960.1:exon3,exon4(YES;YES)||LOC_Os01g45960.2:exon3,exon4(YES;YES)
    NA
    metabolic process,hydrolase activity,metabolic process,hydrolase activity
    LOC_Os01g45960
    +
    exonic
    shoot, root
    NA
    osa_circ_002899
    LOC_Os01g45960.1:exon3,exon4,exon5,exon6(YES;YES)
    NA
    metabolic process,hydrolase activity,metabolic process,hydrolase activity
    LOC_Os01g45960
    +
    intronic
    root
    NA
    osa_circ_002900
    LOC_Os01g45960.1:0;LOC_Os01g45960.2:0
    NA
    metabolic process,hydrolase activity,metabolic process,hydrolase activity
    LOC_Os01g43520
    -
    intronic
    root
    NA
    osa_circ_002755
    LOC_Os01g43520.1:0;LOC_Os01g43520.2:0
    NA
    metabolic process,cellular_component,hydrolase activity,metabolic process,cellular_component,hydrolase activity
    LOC_Os01g43520
    -
    exonic
    seed
    NA
    osa_circ_002756
    LOC_Os01g43520.1:exon7,exon6(YES;YES)||LOC_Os01g43520.2:exon7,exon6(YES;YES)
    NA
    metabolic process,cellular_component,hydrolase activity,metabolic process,cellular_component,hydrolase activity
    LOC_Os01g23620
    +
    intronic
    shoot
    NA
    osa_circ_001633
    LOC_Os01g23620.1:0
    NA
    transport,cellular process,nucleotide binding,plasma membrane
    LOC_Os01g40250
    +
    exonic
    root
    find_circ
    osa_circ_002342
    LOC_Os01g40250.1:exon3,exon4,exon5,exon6(YES;YES)
    NA
    Golgi apparatus,biological_process,binding
    LOC_Os01g40250
    +
    exonic
    shoot, root
    NA
    osa_circ_002343
    LOC_Os01g40250.1:exon3,exon4,exon5,exon6,exon7(YES;YES)
    NA
    Golgi apparatus,biological_process,binding
    LOC_Os01g40250
    +
    exonic
    root
    PcircRNA_finder
    LOC_Os01g40250.1_circ_g_19
    LOC_Os01g40250.1:exon19(YES;YES)
    NA
    Golgi apparatus,biological_process,binding
    LOC_Os01g42260
    -
    intronic
    shoot
    NA
    osa_circ_002529
    LOC_Os01g42260.1:0;LOC_Os01g42260.2:0;LOC_Os01g42260.3:0;LOC_Os01g42260.4:0
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    exonic
    root;root
    PcircRNA_finder;NA
    osa_circ_002530
    LOC_Os01g42260.1:exon16,exon15(YES;YES)||LOC_Os01g42260.2:exon16,exon15(YES;YES)||LOC_Os01g42260.3:exon16,exon15(YES;YES)
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    exonic
    shoot
    NA
    osa_circ_002531
    LOC_Os01g42260.1:exon16,exon15,exon14,exon13,exon12(YES;YES)||LOC_Os01g42260.2:exon16,exon15,exon14,exon13,exon12(YES;YES)||LOC_Os01g42260.3:exon16,exon15,exon14,exon13,exon12(YES;YES)
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    exonic
    root/root
    find_circ
    osa_circ_002532
    LOC_Os01g42260.3:exon14(YES;YES)
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    exonic
    root
    find_circ
    osa_circ_002533
    LOC_Os01g42260.1:exon13,exon12(YES;YES)||LOC_Os01g42260.2:exon13,exon12(YES;YES)||LOC_Os01g42260.3:exon13,exon12(YES;YES)
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    intronic
    shoot
    NA
    osa_circ_002534
    LOC_Os01g42260.1:0;LOC_Os01g42260.2:0;LOC_Os01g42260.3:0;LOC_Os01g42260.4:0
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    exonic
    shoot
    NA
    osa_circ_002535
    LOC_Os01g42260.3:exon12(YES;YES)
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    exonic
    root;root
    PcircRNA_finder;NA
    osa_circ_002536
    LOC_Os01g42260.1:exon11,exon10(YES;YES)||LOC_Os01g42260.3:exon11,exon10(YES;YES)
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    exonic
    root
    PcircRNA_finder
    LOC_Os01g42260.1_circ_g_11_10
    LOC_Os01g42260.1:11,10||LOC_Os01g42260.2:11,10||LOC_Os01g42260.3:11,10||LOC_Os01g42260.4:11,10(NO;NO)
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    exonic
    shoot, root
    NA
    osa_circ_002537
    LOC_Os01g42260.1:exon11,exon10,exon9,exon8,exon7,exon6,exon5,exon4,exon3,exon2(YES;YES)||LOC_Os01g42260.2:exon11,exon10,exon9,exon8,exon7,exon6,exon5,exon4,exon3,exon2(YES;YES)||LOC_Os01g42260.3:exon11,exon10,exon9,exon8,exon7,exon6,exon5,exon4,exon3,exon
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    intronic
    shoot
    NA
    osa_circ_002538
    LOC_Os01g42260.1:0;LOC_Os01g42260.2:0;LOC_Os01g42260.3:0;LOC_Os01g42260.4:0
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    exonic
    root
    NA
    osa_circ_002539
    LOC_Os01g42260.1:exon10,exon9,exon8,exon7,exon6,exon5,exon4,exon3,exon2(YES;YES)||LOC_Os01g42260.2:exon10,exon9,exon8,exon7,exon6,exon5,exon4,exon3,exon2(YES;YES)||LOC_Os01g42260.3:exon10,exon9,exon8,exon7,exon6,exon5,exon4,exon3,exon2(YES;YES)||LOC_Os01g
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    exonic
    shoot
    NA
    osa_circ_002540
    LOC_Os01g42260.1:exon9,exon8,exon7,exon6,exon5,exon4,exon3,exon2(YES;YES)||LOC_Os01g42260.2:exon9,exon8,exon7,exon6,exon5,exon4,exon3,exon2(YES;YES)||LOC_Os01g42260.3:exon9,exon8,exon7,exon6,exon5,exon4,exon3,exon2(YES;YES)||LOC_Os01g42260.4:exon9,exon8,e
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    exonic
    pistil
    NA
    osa_circ_002541
    LOC_Os01g42260.4:exon8(YES;YES)
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    exonic
    root;shoot
    PcircRNA_finder;NA
    osa_circ_002542
    LOC_Os01g42260.1:exon8,exon7,exon6,exon5,exon4,exon3,exon2(YES;YES)||LOC_Os01g42260.2:exon8,exon7,exon6,exon5,exon4,exon3,exon2(YES;YES)||LOC_Os01g42260.3:exon8,exon7,exon6,exon5,exon4,exon3,exon2(YES;YES)||LOC_Os01g42260.4:exon8,exon7,exon6,exon5,exon4,e
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    exonic
    root
    find_circ
    osa_circ_002543
    LOC_Os01g42260.1:exon7,exon6,exon5(YES;YES)||LOC_Os01g42260.2:exon7,exon6,exon5(YES;YES)||LOC_Os01g42260.3:exon7,exon6,exon5(YES;YES)||LOC_Os01g42260.4:exon7,exon6,exon5(YES;YES)
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    exonic
    seed
    NA
    osa_circ_002544
    LOC_Os01g42260.1:exon6,exon5,exon4(YES;YES)||LOC_Os01g42260.2:exon6,exon5,exon4(YES;YES)||LOC_Os01g42260.3:exon6,exon5,exon4(YES;YES)||LOC_Os01g42260.4:exon6,exon5,exon4(YES;YES)
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g42260
    -
    intronic
    shoot
    NA
    osa_circ_002545
    LOC_Os01g42260.1:0;LOC_Os01g42260.2:0;LOC_Os01g42260.3:0;LOC_Os01g42260.4:0
    NA
    biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,flower development,nucleus,reproduction,post-embryonic development,protein binding
    LOC_Os01g43360
    +
    intronic
    root
    NA
    osa_circ_002720
    LOC_Os01g43360.1:0
    NA
    metabolic process,motor activity,biological_process,plasma membrane
    LOC_Os01g43360
    +
    intronic
    root
    NA
    osa_circ_002721
    LOC_Os01g43360.1:0
    NA
    metabolic process,motor activity,biological_process,plasma membrane
    LOC_Os01g25820
    -
    exonic
    root
    PcircRNA_finder
    LOC_Os01g25820.1_circ_g_11_10
    LOC_Os01g25820.1:exon11,exon10(YES;YES)||LOC_Os01g25820.2:exon11,exon10(YES;YES)
    NA
    response to stress,response to biotic stimulus,catalytic activity,cell death,metabolic process,cellular process,response to abiotic stimulus,plasma membrane,response to stress,response to biotic stimulus,catalytic activity,cell death,metabolic process,cellular process,response to abiotic stimulus,plasma membrane