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Arabidopsis alternative back-splicing

Total 69631 records in 2322 Pages. Current page: 1
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  • Circ_regionGene_nameStrandTypeTissuesSoftwareCircular_IDExon_covermiR_tar_exonSequence Description
    AT1G33390
    -
    exonic
    leaves;mixedTissue
    PcircRNA_finder;CIRCexplorer2
    ath-circ11187-AT1G33390
    AT1G33390.1:exon7,exon6,exon5(YES;YES)
    NA
    AT1G33390|ATFAS4|FAS4|FASCIATED STEM 4|F10C21
    AT1G33390
    -
    exonic
    root
    NA
    ath_circ_003547
    AT1G33390.1:exon3(YES;YES)
    NA
    AT1G33390|ATFAS4|FAS4|FASCIATED STEM 4|F10C21
    AT1G28560
    -
    exonic
    mixedTissue
    CIRCexplorer2
    ath-circ9703-AT1G28560
    AT1G28560.1:exon9,exon8(YES;YES)||AT1G28560.2:exon10,exon9(YES;YES)
    ath-miR5020a,chr01:10039313-10039334|intron
    AT1G28560|SRD2|SHOOT REDIFFERENTIATION DEFECTIVE 2|F3M18
    AT1G28560
    -
    exonic
    mixedTissue
    CIRCexplorer2
    ath-circ9704-AT1G28560
    AT1G28560.2:exon7(YES;YES)
    NA
    AT1G28560|SRD2|SHOOT REDIFFERENTIATION DEFECTIVE 2|F3M18
    AT1G28560
    -
    exonic
    leaves
    PcircRNA_finder
    AT1G28560.1_circ_g_5_4_3_2
    AT1G28560.1:exon5,exon4,exon3,exon2(YES;YES)||AT1G28560.2:exon5,exon4,exon3,exon2(YES;YES)
    ath-miR5021,chr01:10040442-10040461|intron
    AT1G28560|SRD2|SHOOT REDIFFERENTIATION DEFECTIVE 2|F3M18
    AT1G32490
    -
    exonic
    mixedTissue
    CIRCexplorer2
    ath-circ11001-AT1G32490
    AT1G32490.1:exon27,exon26(YES;YES)||AT1G32490.2:exon27,exon26(YES;YES)
    NA
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    mixedTissue
    CIRCexplorer2
    ath-circ11002-AT1G32490
    AT1G32490.1:exon27,exon26,exon25(YES;YES)||AT1G32490.2:exon27,exon26,exon25(YES;YES)
    NA
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    leaf
    NA
    ath_circ_003463
    AT1G32490.1:exon26,exon25,exon24(YES;YES)||AT1G32490.2:exon26,exon25,exon24(YES;YES)
    NA
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    mixedTissue
    CIRCexplorer2
    ath-circ11003-AT1G32490
    AT1G32490.2:exon25(YES;YES)
    NA
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    mixedTissue
    CIRCexplorer2
    ath-circ11004-AT1G32490
    AT1G32490.1:exon25,exon24(YES;YES)||AT1G32490.2:exon25,exon24(YES;YES)
    NA
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    mixedTissue
    CIRCexplorer2
    ath-circ11005-AT1G32490
    AT1G32490.2:exon24(YES;YES)
    NA
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    mixedTissue
    CIRCexplorer2
    ath-circ11006-AT1G32490
    AT1G32490.1:exon24,exon23(YES;YES)||AT1G32490.2:exon24,exon23(YES;YES)
    NA
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    leaves
    PcircRNA_finder
    AT1G32490.1_circ_g_23_22_21
    AT1G32490.1:exon23,exon22,exon21(YES;YES)||AT1G32490.2:exon23,exon22,exon21(YES;YES)
    ath-miR5630a;ath-miR5630b,chr01:11744213-11744194|AT1G32490.1:exon_22;ath-miR5630a;ath-miR5630b,chr01:11744213-11744194|AT1G32490.2:exon_22
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    leaves
    PcircRNA_finder
    AT1G32490.1_circ_g_21_20_19_18_17_16_15_14
    AT1G32490.1:exon_21,exon_20,exon_19,exon_18,exon_17,exon_16,exon_15,exon_14||AT1G32490.2:exon_21,exon_20,exon_19,exon_18,exon_17,exon_16,exon_15,exon_14(NO;NO)
    NA
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    leaves
    PcircRNA_finder
    AT1G32490.1_circ_g_20_19_18_17
    AT1G32490.1:exon20,exon19,exon18,exon17(YES;YES)||AT1G32490.2:exon20,exon19,exon18,exon17(YES;YES)
    NA
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    inflorescences
    NA
    ath_circ_003465
    AT1G32490.1:exon20,exon19,exon18,exon17,exon16,exon15(YES;YES)||AT1G32490.2:exon20,exon19,exon18,exon17,exon16,exon15(YES;YES)
    NA
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    endosperm
    CIRCexplorer2
    ath-circ11008-AT1G32490
    AT1G32490.2:exon19(YES;YES)
    NA
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    leaves
    PcircRNA_finder
    AT1G32490.1_circ_g_18_17_16_15
    AT1G32490.1:exon18,exon17,exon16,exon15(YES;YES)||AT1G32490.2:exon18,exon17,exon16,exon15(YES;YES)
    NA
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    inflorescences
    NA
    ath_circ_003467
    AT1G32490.1:exon18,exon17,exon16,exon15,exon14,exon13,exon12,exon11,exon10,exon9,exon8,exon7,exon6,exon5(YES;YES)||AT1G32490.2:exon18,exon17,exon16,exon15,exon14,exon13,exon12,exon11,exon10,exon9,exon8,exon7,exon6,exon5(YES;YES)
    ath-miR413,chr01:11746497-11746478|AT1G32490.1:exon_13;ath-miR413,chr01:11746497-11746478|AT1G32490.2:exon_13;ath-miR156a-5p;ath-miR156b-5p;ath-miR156c-5p;ath-miR156d-5p;ath-miR156e;ath-miR156f-5p,chr01:11747368-11747349|AT1G32490.1:exon_9;ath-miR156a-5p;
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    leaves
    PcircRNA_finder
    AT1G32490.1_circ_g_17_16_15_14_13_12_11
    AT1G32490.1:exon17,exon16,exon15,exon14,exon13,exon12,exon11(YES;YES)||AT1G32490.2:exon17,exon16,exon15,exon14,exon13,exon12,exon11(YES;YES)
    ath-miR156a-5p;ath-miR156b-5p;ath-miR156c-5p;ath-miR156d-5p;ath-miR156e;ath-miR156f-5p,chr01:11746183-11746164|AT1G32490.1:exon_15;ath-miR156a-5p;ath-miR156b-5p;ath-miR156c-5p;ath-miR156d-5p;ath-miR156e;ath-miR156f-5p,chr01:11746183-11746164|AT1G32490.2:e
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    mixedTissue
    CIRCexplorer2
    ath-circ11009-AT1G32490
    AT1G32490.1:exon17,exon16,exon15,exon14,exon13,exon12,exon11,exon10,exon9,exon8,exon7,exon6(YES;YES)||AT1G32490.2:exon17,exon16,exon15,exon14,exon13,exon12,exon11,exon10,exon9,exon8,exon7,exon6(YES;YES)
    ath-miR156a-5p;ath-miR156b-5p;ath-miR156c-5p;ath-miR156d-5p;ath-miR156e;ath-miR156f-5p,chr01:11747548-11747567|intron
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    mixedTissue
    CIRCexplorer2
    ath-circ11010-AT1G32490
    AT1G32490.1:exon16,exon15,exon14(YES;YES)||AT1G32490.2:exon16,exon15,exon14(YES;YES)
    NA
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    leaves
    PcircRNA_finder
    AT1G32490.1_circ_g_16_15_14_13
    AT1G32490.1:exon16,exon15,exon14,exon13(YES;YES)||AT1G32490.2:exon16,exon15,exon14,exon13(YES;YES)
    ath-miR156a-5p;ath-miR156b-5p;ath-miR156c-5p;ath-miR156d-5p;ath-miR156e;ath-miR156f-5p,chr01:11746039-11746058|intron
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    cotyledon
    CIRCexplorer2
    ath-circ11011-AT1G32490
    AT1G32490.2:exon16,exon15,exon14,exon13,exon12(YES;YES)
    ath-miR156a-5p;ath-miR156b-5p;ath-miR156c-5p;ath-miR156d-5p;ath-miR156e;ath-miR156f-5p,chr01:11746219-11746238|intron
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    leaves
    PcircRNA_finder
    AT1G32490.1_circ_g_16_15_14_13_12_11
    AT1G32490.1:exon16,exon15,exon14,exon13,exon12,exon11(YES;YES)||AT1G32490.2:exon16,exon15,exon14,exon13,exon12,exon11(YES;YES)
    ath-miR156a-5p;ath-miR156b-5p;ath-miR156c-5p;ath-miR156d-5p;ath-miR156e;ath-miR156f-5p,chr01:11746412-11746431|intron
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    root
    NA
    ath_circ_003468
    AT1G32490.1:exon16,exon15,exon14,exon13,exon12,exon11,exon10,exon9,exon8,exon7(YES;YES)||AT1G32490.2:exon16,exon15,exon14,exon13,exon12,exon11,exon10,exon9,exon8,exon7(YES;YES)
    ath-miR413,chr01:11746524-11746505|AT1G32490.1:exon_13;ath-miR413,chr01:11746524-11746505|AT1G32490.2:exon_13;ath-miR156a-5p;ath-miR156b-5p;ath-miR156c-5p;ath-miR156d-5p;ath-miR156e;ath-miR156f-5p,chr01:11747395-11747376|AT1G32490.1:exon_9;ath-miR156a-5p;
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    cotyledon
    CIRCexplorer2
    ath-circ11012-AT1G32490
    AT1G32490.1:exon15,exon14,exon13,exon12(YES;YES)
    ath-miR156a-5p;ath-miR156b-5p;ath-miR156c-5p;ath-miR156d-5p;ath-miR156e;ath-miR156f-5p,chr01:11746407-11746426|intron
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    mixedTissue
    CIRCexplorer2
    ath-circ11013-AT1G32490
    AT1G32490.2:exon14,exon13,exon12(YES;YES)
    ath-miR156a-5p;ath-miR156b-5p;ath-miR156c-5p;ath-miR156d-5p;ath-miR156e;ath-miR156f-5p,chr01:11746581-11746600|intron
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    hypocotyl
    CIRCexplorer2
    ath-circ11014-AT1G32490
    AT1G32490.1:exon14,exon13,exon12,exon11(YES;YES)||AT1G32490.2:exon14,exon13,exon12,exon11(YES;YES)
    ath-miR156a-5p;ath-miR156b-5p;ath-miR156c-5p;ath-miR156d-5p;ath-miR156e;ath-miR156f-5p,chr01:11746774-11746793|intron
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14
    AT1G32490
    -
    exonic
    leaves
    PcircRNA_finder
    AT1G32490.1_circ_g_14_13_12_11_10_9
    AT1G32490.1:exon14,exon13,exon12,exon11,exon10,exon9(YES;YES)||AT1G32490.2:exon14,exon13,exon12,exon11,exon10,exon9(YES;YES)
    ath-miR413,chr01:11746373-11746354|AT1G32490.1:exon_14;ath-miR413,chr01:11746373-11746354|AT1G32490.2:exon_14;ath-miR156a-5p;ath-miR156b-5p;ath-miR156c-5p;ath-miR156d-5p;ath-miR156e;ath-miR156f-5p,chr01:11747244-11747225|AT1G32490.1:exon_10;ath-miR156a-5p
    AT1G32490|EMB2733|ESP3|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14