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ASmiR Selection

Oryza sativa AlternativeSplicing Gene

Total 42493 records in 1417 Pages. Current page: 1
1/1417 1 2 3 4 5 6 7 8 9 10 11 Next> Last>>

  • IDLocusAsregionStrandTypeCoordinatePositionSequence DescriptionSequencing PlatformInparanoid
    1
    LOC_Os01g61410
    +
    AltA
    chr01:35511568-35511769;chr01:35511529-35511567;chr01:35511379-35511567
    overlap(sense)
    catalytic activity,membrane,mitochondrion,metabolic process,catalytic activity,membrane,mitochondrion,metabolic process,catalytic activity,membrane,mitochondrion,metabolic process
    Illumina
    2
    LOC_Os09g26000
    +
    ExonS
    chr09:15625666-15626573;chr09:15626575-15626662;chr09:15626663-15627217
    up_897bp
    cell,membrane,transport,cellular process,response to abiotic stimulus,cellular homeostasis,transporter activity
    Illumina
    3
    LOC_Os01g74410
    +
    AltD
    chr01:43096742-43096952;chr01:43096716-43096741;chr01:43096477-43096715
    overlap(sense)
    biological_process,DNA binding,nucleus,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity,biological_process,DNA binding,nucleus,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity
    Illumina
    --NA--
    4
    LOC_Os10g19880
    -
    AltA
    chr10:9923510-9923578;chr10:9923579-9923645;chr10:9923579-9923731
    overlap(sense)
    cell,metabolic process,hydrolase activity,biological_process
    Illumina
    5
    LOC_Os01g61430
    -
    ExonS
    chr01:35522290-35523257;chr01:35522258-35522289;chr01:35521753-35522257
    overlap(sense)
    biological_process
    Illumina
    6
    LOC_Os07g12530
    -
    ExonS
    chr07:7156164-7156554;chr07:7155975-7156163;chr07:7155895-7155974
    overlap(sense)
    plastid,plastid
    Illumina
    7
    LOC_Os07g05380
    -
    AltD
    chr07:2467363-2467442;chr07:2467443-2467466;chr07:2467468-2467500
    overlap(antisense)
    catabolic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,biological_process,hydrolase activity
    Illumina
    8
    LOC_Os01g40250
    +
    AltA
    chr01:22724003-22725728;chr01:22723945-22724002;chr01:22723590-22724002
    overlap(sense)
    Golgi apparatus,biological_process,binding
    Illumina
    9
    LOC_Os02g07680
    +
    ExonS
    chr02:3998172-3998410;chr02:3998412-3998505;chr02:3998506-3998790
    overlap(sense)
    molecular_function,binding,metabolic process,oxygen binding,catalytic activity,plastid,molecular_function,binding,metabolic process,oxygen binding,catalytic activity,plastid,molecular_function,binding,metabolic process,oxygen binding,catalytic activity,plastid,molecular_function,binding,metabolic process,oxygen binding,catalytic activity,plastid,molecular_function,binding,metabolic process,oxygen binding,catalytic activity,plastid
    Illumina
    10
    LOC_Os06g41880
    -
    IntronR
    chr06:25125299-25125477;chr06:25125204-25125298;chr06:25125153-25125203
    overlap(antisense)
    hydrolase activity,membrane,protein metabolic process,metabolic process,cell wall,cellular component organization,cellular process,external encapsulating structure,extracellular region
    Illumina
    --NA--
    11
    LOC_Os01g51280
    +
    ExonS
    chr01:29480006-29480088;chr01:29480090-29480133;chr01:29480134-29480208
    overlap(sense)
    cellular_component,metabolic process,hydrolase activity,cellular process,biological_process,cellular_component,metabolic process,hydrolase activity,cellular process,biological_process
    Illumina
    12
    LOC_Os03g02100
    +
    AltD
    chr03:667223-667445;chr03:666663-667222;chr03:665405-666662
    overlap(sense)
    metabolic process,catalytic activity,nucleotide binding,cytosol,translation,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,mitochondrion,reproduction,post-embryonic development,embryo development,plastid,metabolic process,catalytic activity,nucleotide binding,cytosol,translation,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,mitochondrion,reproduction,post-embryonic development,embryo development,plastid
    Illumina
    13
    LOC_Os01g31810
    -
    AltA
    chr01:17422763-17424398;chr01:17424399-17424427;chr01:17424399-17424503
    overlap(sense)
    cellular_component,RNA binding,nucleotide binding,biological_process,nucleic acid binding
    Illumina
    14
    LOC_Os07g02710
    +
    IntronR
    chr07:979479-979519;chr07:979520-979661;chr07:979662-979720
    overlap(sense)
    molecular_function,membrane,vacuole,biological_process
    Illumina
    15
    LOC_Os04g57210
    +
    AltD
    chr04:34085304-34085740;chr04:34084950-34085303;chr04:34084888-34084949
    overlap(sense)
    nucleus,structural molecule activity,cellular process,nucleus,structural molecule activity,cellular process,nucleus,structural molecule activity,cellular process
    Illumina
    16
    LOC_Os09g30412
    -
    ExonS
    chr09:18517289-18528702;chr09:18517244-18517288;chr09:18516511-18517243
    overlap(sense)
    response to stress,response to abiotic stimulus,nucleotide binding,cellular process,protein binding,cytosol,mitochondrion,hydrolase activity,protein metabolic process,nucleus,cellular_component,response to biotic stimulus,flower development,cell wall,post-embryonic development,catabolic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,metabolic process,multicellular organismal development
    Illumina
    17
    LOC_Os05g38160
    +
    IntronR
    chr05:22387485-22387656;chr05:22387657-22387811;chr05:22387812-22387862
    overlap(sense)
    molecular_function,endoplasmic reticulum,transport,cellular process
    Illumina
    18
    LOC_Os12g44150
    +
    AltA
    chr12:27389496-27389591;chr12:27389472-27389495;chr12:27389398-27389495
    overlap(sense)
    nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,biosynthetic process,membrane,metabolic process,catabolic process,transport,plasma membrane,hydrolase activity,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,biosynthetic process,membrane,metabolic process,catabolic process,transport,plasma membrane,hydrolase activity
    Illumina
    19
    LOC_Os02g39160
    -
    AltA
    chr02:23657451-23657568;chr02:23657569-23657608;chr02:23657569-23657700
    overlap(sense)
    biosynthetic process,cellular process,lipid metabolic process,signal transduction,response to stress,response to biotic stimulus,metabolic process,carbohydrate metabolic process,binding,plastid,catalytic activity
    Illumina
    20
    LOC_Os02g07480
    -
    ExonS
    chr02:3860953-3861048;chr02:3860831-3860952;chr02:3860384-3860830
    overlap(sense)
    molecular_function,biological_process,vacuole,plastid,molecular_function,biological_process,vacuole,plastid
    Illumina
    21
    LOC_Os01g61410
    +
    AltA
    chr01:35511655-35511769;chr01:35511568-35511654;chr01:35511379-35511654
    overlap(sense)
    catalytic activity,membrane,mitochondrion,metabolic process,catalytic activity,membrane,mitochondrion,metabolic process,catalytic activity,membrane,mitochondrion,metabolic process
    Illumina
    22
    LOC_Os03g38970
    -
    AltA
    chr03:21657511-21657564;chr03:21657565-21657610;chr03:21657565-21657697
    overlap(sense)
    cytosol
    Illumina
    23
    LOC_Os03g25480
    -
    ExonS
    chr03:14557978-14558318;chr03:14557511-14557977;chr03:14556162-14557510
    down_1282bp
    cell,molecular_function,binding,catalytic activity,metabolic process,oxygen binding
    Illumina
    --NA--
    24
    LOC_Os08g27720
    +
    AltA
    chr08:16895430-16895533;chr08:16895383-16895429;chr08:16894083-16895429
    overlap(sense)
    protein binding,biological_process,plasma membrane,protein binding,biological_process,plasma membrane
    Illumina
    --NA--
    25
    LOC_Os12g09089
    -
    AltD
    chr12:4750418-4755843;chr12:4755844-4755914;chr12:4755916-4756021
    overlap(sense)
    molecular_function,biological_process,molecular_function,biological_process
    Illumina
    26
    LOC_Os02g52390
    +
    AltD
    chr02:32063728-32063809;chr02:32063680-32063727;chr02:32063595-32063679
    overlap(sense)
    extracellular region,hydrolase activity,biological_process,protein metabolic process,mitochondrion,plastid
    Illumina
    27
    LOC_Os01g31810
    -
    IntronR
    chr01:17424287-17424398;chr01:17423917-17424286;chr01:17422763-17423916
    overlap(sense)
    cellular_component,RNA binding,nucleotide binding,biological_process,nucleic acid binding
    Illumina
    28
    LOC_Os11g36430
    -
    ExonS
    chr11:21481407-21481489;chr11:21481296-21481406;chr11:21481211-21481295
    overlap(sense)
    protein metabolic process,catabolic process,cellular process,multicellular organismal development,binding,cell cycle,plasma membrane,protein metabolic process,catabolic process,cellular process,multicellular organismal development,binding,cell cycle,plasma membrane,protein metabolic process,catabolic process,cellular process,multicellular organismal development,binding,cell cycle,plasma membrane,protein metabolic process,catabolic process,cellular process,multicellular organismal development,binding,cell cycle,plasma membrane
    Illumina
    29
    LOC_Os06g49180
    -
    IntronR
    chr06:29800975-29801304;chr06:29800899-29800974;chr06:29800821-29800898
    overlap(sense)
    molecular_function,biological_process
    Illumina
    30
    LOC_Os05g25390
    +
    IntronR
    chr05:14750743-14750784;chr05:14750785-14751515;chr05:14751516-14751833
    overlap(sense)
    metabolic process,cellular process,kinase activity,protein modification process
    Illumina